TriTan
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  • Usage
  • Tutorials
    • Single-cell RNA-seq and ATAC-seq integration
    • Cite-seq integration
    • Tri-omics integration
TriTan
  • Tutorials
  • Edit on GitHub

Tutorials

  • Single-cell RNA-seq and ATAC-seq integration
    • Load libraries and data
    • Integrate data
    • Interpret the results
      • Visualize the cell clusters
      • Visualize the joint embedding
      • Find signature feature groups for each cell cype
      • Find associations of feature groups across omics
    • Saving progress
  • Cite-seq integration
    • Load libraries and data
      • PREPROCESSING (Customized)
      • construct MuData object
      • Training
        • Customize your TriTan model
      • Find signature feature groups for each cell cype
      • Find associations of feature groups across omics
    • Saving the process
  • Tri-omics integration
    • data introduction and prepocessing
    • running TriTan
    • downstream analysis
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